CDS

Accession Number TCMCG057C17531
gbkey CDS
Protein Id XP_018481231.1
Location join(14640712..14640773,14640886..14640967,14641134..14641209,14641341..14641429,14641523..14641599,14641691..14641756,14641838..14641950,14642063..14642160,14642279..14642365,14642453..14642533,14642652..14642780,14642898..14643012,14643121..14643203,14643356..14643436,14643523..14643651,14643790..14643879,14643966..14644013,14644094..14644303)
Gene LOC108852225
GeneID 108852225
Organism Raphanus sativus

Protein

Length 571aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018625729.1
Definition PREDICTED: transcription factor IIIB 60 kDa subunit-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15196        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000126        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006384        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009303        [VIEW IN EMBL-EBI]
GO:0009304        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090576        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0098781        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTGGTGTAACCATTGTGGGAAGGAAGTTGCCGGATTACGCCCAGAAGGCGGTGCTTTGGCATGTAATAAATGTGGGAGGATATTGGAAAACTTTTATTTTTCTGATGAAGTTACTTTCATTAAGAATGCCGCTGGACAGAGCCAAGCGTCAGGTAACATAGTCAGTAGTGTTTCGAGTGGGATTACAAGCTCACGTGAAAGGAGAAATAGAATTGCTAGAGATGAGTTAATGAATTTGAGAGATGCCTTGCAAATTGGTGATGACAGTGATGTTGTGGTTAATATGGCTTTCCGATTATTTGGGGTCGCAGCTGACCAAAACTTCACCAAAGGGCGCAGAAGTGAACTAGTACTCTCTTCCTGTCTCTACTTGGCTTGCAGGCAAAATAGGCAAAAGATGTTAGAATTTCTTCTTATTGATTTTTCGAGCTACCTTCGAGTTTCCGTTTACGAGTTAGGTTCTGTCTACTTGCAACTCTGTGAACTGCTCTTCTTGGTGGAAAACGACAACTATGAGGAGCTTGTTGATCCTTCAATCTTCATTCCTCGATTCACAAAAAGCTTATTAAAAGGTGAACATGACAACGATAAAACAAGAAAAAAAGTCATAAAAACGGCTACCAACATTATAGCTAGTATGAAGAGAGATTGGATGCAGACCGGCCGCAAACCAAGTGGAATATGTGGAGCAGCAATTTACATAGCTGCCCTTTCTCGTGGTATCAAGTGCTCGACCACCGATATTGCACACATTGTGCATATGTGTGGAGCAACAATAACTAAAAGATTGAATGAGTTTGCTAACACCGAAGCTGCAAGTTTAACTGTTAAGGAGCTCAAAAAAAGCGAAAAACCTTTTACGCCAAGACCAAATTCCGACAAGGAAGTAGTGAACTGTAAACATAAGGATTCAAAAAGTTTTGGTTATGGATTATGCAAGGACTGTCACGAAAAGTTCATGAAAGTTTCTGGTGGAGTTGTTGGTGGGTCGGATCCTCCTGCTTTCCAGCGAGCAGAGAAAGAGAGAATGGCAAAAGCAGCTAGAGAGGAAAACGAGGGAGGAGGCATTGAGAAAATTGAAGAAGAACCATATTGGAATGCTGAAGCTTCGGATGAGTCAGACAATCTTTCTGACCTCGATGGTGATCCTGTGGTGGATGGCTGTATTCTTGACGAGGACGAAAAGGTAGCCATTAAAAAATCATGGGAGTTTCTTAACAGAGACTGGCTTAAGGAGCAAGCGGATAAGGAAGCAGCTCTGAAGACTGCTAGTGAAGCTTTCAACGCGAGCAATGCTAATTGCCCTGAATACGCAAGAAATCTTGTTGAAGCTTCTAAAGCATCTGTGACTAATTCTAGAAAGGAAAAGCGGCAAAAACGTGCAGAGGAAGCAAAGAACGCGCCTCCCGCATCCACACCTTTGGAAGCTGTTACCAGAGCGCTTGGTAGAAAGAATATCAGTTTCAACTACGATCTTTTGGAAGAGCTCTTAGATACTTCCTCAGGTGAGAAGTCCCACAAGAAATCAAGAACCGAAACACTTATAGAGAAGAAGAAGAAGGAAGTTGAAATTGAAGAGGAGGAAGAAGAAGAAGCTGAAGAAGATGAAGAACAACCATACGAAATGAACACAGATGAGAAATTCTATGAAGACCAAGTGGAAGAGGAAGAGGAAGAGGATGAGGATGGTTATGATTTTGGATTGTATTAA
Protein:  
MVWCNHCGKEVAGLRPEGGALACNKCGRILENFYFSDEVTFIKNAAGQSQASGNIVSSVSSGITSSRERRNRIARDELMNLRDALQIGDDSDVVVNMAFRLFGVAADQNFTKGRRSELVLSSCLYLACRQNRQKMLEFLLIDFSSYLRVSVYELGSVYLQLCELLFLVENDNYEELVDPSIFIPRFTKSLLKGEHDNDKTRKKVIKTATNIIASMKRDWMQTGRKPSGICGAAIYIAALSRGIKCSTTDIAHIVHMCGATITKRLNEFANTEAASLTVKELKKSEKPFTPRPNSDKEVVNCKHKDSKSFGYGLCKDCHEKFMKVSGGVVGGSDPPAFQRAEKERMAKAAREENEGGGIEKIEEEPYWNAEASDESDNLSDLDGDPVVDGCILDEDEKVAIKKSWEFLNRDWLKEQADKEAALKTASEAFNASNANCPEYARNLVEASKASVTNSRKEKRQKRAEEAKNAPPASTPLEAVTRALGRKNISFNYDLLEELLDTSSGEKSHKKSRTETLIEKKKKEVEIEEEEEEEAEEDEEQPYEMNTDEKFYEDQVEEEEEEDEDGYDFGLY